The SWEET gene family in Hevea brasiliensis - its evolution and expression compared with four other plant species.
Identifieur interne : 001166 ( Main/Exploration ); précédent : 001165; suivant : 001167The SWEET gene family in Hevea brasiliensis - its evolution and expression compared with four other plant species.
Auteurs : Jin-Lei Sui ; Xiao-Hu Xiao ; Ji-Yan Qi ; Yong-Jun Fang ; Chao-Rong TangSource :
- FEBS open bio [ 2211-5463 ] ; 2017.
Abstract
SWEET proteins play an indispensable role as a sugar efflux transporter in plant development and stress responses. The SWEET genes have previously been characterized in several plants. Here, we present a comprehensive analysis of this gene family in the rubber tree, Hevea brasiliensis. There are 36 members of the SWEET gene family in this species, making it one of the largest families in plant genomes sequenced so far. Structure and phylogeny analyses of these genes in Hevea and in other species demonstrated broad evolutionary conservation. RNA-seq analyses revealed that SWEET2, 16, and 17 might represent the main evolutionary direction of SWEET genes in plants. Our results in Hevea suggested the involvement of HbSWEET1a, 2e, 2f, and 3b in phloem loading, HbSWEET10a and 16b in laticifer sugar transport, and HbSWEET9a in nectary-specific sugar transport. Parallel studies of RNA-seq analyses extended to three other plant species (Manihot esculenta, Populus trichocarpa, and Arabidopsis thaliana) produced findings which implicated MeSWEET10a, 3a, and 15b in M. esculenta storage root development, and the involvement of PtSWEET16b and PtSWEET16d in P. trichocarpa xylem development. RT-qPCR results further revealed that HbSWEET10a, 16b, and 1a play important roles in phloem sugar transport. The results from this study provide a foundation not only for further investigation into the functionality of the SWEET gene family in Hevea, especially in its sugar transport for latex production, but also for related studies of this gene family in the plant kingdom.
DOI: 10.1002/2211-5463.12332
PubMed: 29226081
PubMed Central: PMC5715295
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its evolution and expression compared with four other plant species.</title><author><name sortKey="Sui, Jin Lei" sort="Sui, Jin Lei" uniqKey="Sui J" first="Jin-Lei" last="Sui">Jin-Lei Sui</name><affiliation><nlm:affiliation>Institute of Tropical Agriculture and Forestry Hainan University Haikou Hainan China.</nlm:affiliation><wicri:noCountry code="no comma">Institute of Tropical Agriculture and Forestry Hainan University Haikou Hainan China.</wicri:noCountry></affiliation><affiliation><nlm:affiliation>Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</nlm:affiliation><wicri:noCountry code="no comma">Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</wicri:noCountry></affiliation></author><author><name sortKey="Xiao, Xiao Hu" sort="Xiao, Xiao Hu" uniqKey="Xiao X" first="Xiao-Hu" last="Xiao">Xiao-Hu Xiao</name><affiliation><nlm:affiliation>Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</nlm:affiliation><wicri:noCountry code="no comma">Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</wicri:noCountry></affiliation></author><author><name sortKey="Qi, Ji Yan" sort="Qi, Ji Yan" uniqKey="Qi J" first="Ji-Yan" last="Qi">Ji-Yan Qi</name><affiliation><nlm:affiliation>Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</nlm:affiliation><wicri:noCountry code="no comma">Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</wicri:noCountry></affiliation></author><author><name sortKey="Fang, Yong Jun" sort="Fang, Yong Jun" uniqKey="Fang Y" first="Yong-Jun" last="Fang">Yong-Jun Fang</name><affiliation><nlm:affiliation>Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</nlm:affiliation><wicri:noCountry code="no comma">Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</wicri:noCountry></affiliation></author><author><name sortKey="Tang, Chao Rong" sort="Tang, Chao Rong" uniqKey="Tang C" first="Chao-Rong" last="Tang">Chao-Rong Tang</name><affiliation><nlm:affiliation>Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</nlm:affiliation><wicri:noCountry code="no comma">Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</wicri:noCountry></affiliation></author></analytic><series><title level="j">FEBS open bio</title><idno type="ISSN">2211-5463</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">SWEET proteins play an indispensable role as a sugar efflux transporter in plant development and stress responses. The <i>SWEET</i> genes have previously been characterized in several plants. Here, we present a comprehensive analysis of this gene family in the rubber tree, <i>Hevea brasiliensis</i>. There are 36 members of the SWEET gene family in this species, making it one of the largest families in plant genomes sequenced so far. Structure and phylogeny analyses of these genes in Hevea and in other species demonstrated broad evolutionary conservation. RNA-seq analyses revealed that <i>SWEET2, 16,</i> and <i>17</i> might represent the main evolutionary direction of <i>SWEET</i> genes in plants. Our results in Hevea suggested the involvement of <i>HbSWEET1a</i>, <i>2e</i>, <i>2f</i>, and <i>3b</i> in phloem loading, <i>HbSWEET10a</i> and <i>16b</i> in laticifer sugar transport<i>,</i> and <i>HbSWEET9a</i> in nectary-specific sugar transport. Parallel studies of RNA-seq analyses extended to three other plant species (<i>Manihot esculenta</i>, <i>Populus trichocarpa</i>, and <i>Arabidopsis thaliana</i>) produced findings which implicated <i>MeSWEET10a, 3a,</i> and <i>15b</i> in <i>M. esculenta</i> storage root development, and the involvement of <i>PtSWEET16b</i> and <i>PtSWEET16d</i> in <i>P. trichocarpa</i> xylem development. RT-qPCR results further revealed that <i>HbSWEET10a, 16b,</i> and <i>1a</i> play important roles in phloem sugar transport. The results from this study provide a foundation not only for further investigation into the functionality of the SWEET gene family in Hevea, especially in its sugar transport for latex production, but also for related studies of this gene family in the plant kingdom.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">29226081</PMID><DateRevised><Year>2019</Year><Month>11</Month><Day>20</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">2211-5463</ISSN><JournalIssue CitedMedium="Print"><Volume>7</Volume><Issue>12</Issue><PubDate><Year>2017</Year><Month>12</Month></PubDate></JournalIssue><Title>FEBS open bio</Title><ISOAbbreviation>FEBS Open Bio</ISOAbbreviation></Journal><ArticleTitle>The SWEET gene family in <i>Hevea brasiliensis</i> - its evolution and expression compared with four other plant species.</ArticleTitle><Pagination><MedlinePgn>1943-1959</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1002/2211-5463.12332</ELocationID><Abstract><AbstractText>SWEET proteins play an indispensable role as a sugar efflux transporter in plant development and stress responses. The <i>SWEET</i> genes have previously been characterized in several plants. Here, we present a comprehensive analysis of this gene family in the rubber tree, <i>Hevea brasiliensis</i>. There are 36 members of the SWEET gene family in this species, making it one of the largest families in plant genomes sequenced so far. Structure and phylogeny analyses of these genes in Hevea and in other species demonstrated broad evolutionary conservation. RNA-seq analyses revealed that <i>SWEET2, 16,</i> and <i>17</i> might represent the main evolutionary direction of <i>SWEET</i> genes in plants. Our results in Hevea suggested the involvement of <i>HbSWEET1a</i>, <i>2e</i>, <i>2f</i>, and <i>3b</i> in phloem loading, <i>HbSWEET10a</i> and <i>16b</i> in laticifer sugar transport<i>,</i> and <i>HbSWEET9a</i> in nectary-specific sugar transport. Parallel studies of RNA-seq analyses extended to three other plant species (<i>Manihot esculenta</i>, <i>Populus trichocarpa</i>, and <i>Arabidopsis thaliana</i>) produced findings which implicated <i>MeSWEET10a, 3a,</i> and <i>15b</i> in <i>M. esculenta</i> storage root development, and the involvement of <i>PtSWEET16b</i> and <i>PtSWEET16d</i> in <i>P. trichocarpa</i> xylem development. RT-qPCR results further revealed that <i>HbSWEET10a, 16b,</i> and <i>1a</i> play important roles in phloem sugar transport. The results from this study provide a foundation not only for further investigation into the functionality of the SWEET gene family in Hevea, especially in its sugar transport for latex production, but also for related studies of this gene family in the plant kingdom.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Sui</LastName><ForeName>Jin-Lei</ForeName><Initials>JL</Initials><AffiliationInfo><Affiliation>Institute of Tropical Agriculture and Forestry Hainan University Haikou Hainan China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Xiao</LastName><ForeName>Xiao-Hu</ForeName><Initials>XH</Initials><AffiliationInfo><Affiliation>Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Qi</LastName><ForeName>Ji-Yan</ForeName><Initials>JY</Initials><AffiliationInfo><Affiliation>Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Fang</LastName><ForeName>Yong-Jun</ForeName><Initials>YJ</Initials><AffiliationInfo><Affiliation>Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tang</LastName><ForeName>Chao-Rong</ForeName><Initials>CR</Initials><AffiliationInfo><Affiliation>Key Lab of Rubber Biology Ministry of Agriculture & Rubber Research Institute Chinese Academy of Tropical Agricultural Sciences Danzhou Hainan China.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>10</Month><Day>30</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>FEBS Open Bio</MedlineTA><NlmUniqueID>101580716</NlmUniqueID><ISSNLinking>2211-5463</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">Hevea brasiliensis</Keyword><Keyword MajorTopicYN="Y">SWEET</Keyword><Keyword MajorTopicYN="Y">gene expression</Keyword><Keyword MajorTopicYN="Y">structure and evolution</Keyword><Keyword MajorTopicYN="Y">sugar transport</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2017</Year><Month>07</Month><Day>21</Day></PubMedPubDate><PubMedPubDate 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first="Yong-Jun" last="Fang">Yong-Jun Fang</name><name sortKey="Qi, Ji Yan" sort="Qi, Ji Yan" uniqKey="Qi J" first="Ji-Yan" last="Qi">Ji-Yan Qi</name><name sortKey="Sui, Jin Lei" sort="Sui, Jin Lei" uniqKey="Sui J" first="Jin-Lei" last="Sui">Jin-Lei Sui</name><name sortKey="Tang, Chao Rong" sort="Tang, Chao Rong" uniqKey="Tang C" first="Chao-Rong" last="Tang">Chao-Rong Tang</name><name sortKey="Xiao, Xiao Hu" sort="Xiao, Xiao Hu" uniqKey="Xiao X" first="Xiao-Hu" last="Xiao">Xiao-Hu Xiao</name></noCountry></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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